miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|188410162|gb|EY790897.1|EY790897 GAACAATTAGTGGCAACAGCGCATTTACATTGACAACAGGAACAACAATAAGAAAGAGGTGCATTACAGAGGAGTTAGAA
AGAGGCCTTGGGGCCGATACGCTGCCGAGATAAGAGACCCCGGGAAGAAGAGCCGCGTGTGGCTTGGCACCTTCGATACC
GCTGAGGAAGCCGCCAGGGCTTACGACGCCGCGGCGCGTGAGTTTCGCGGCTCGAAGGCCAAAACGAACTTCCCTTTACC
CAGCGAAATCGTGGCCATCAACAAGAATAGCAACAACCAGCAGAGCCCGAGCCAGAGCAGTACCGTGGAGTCCTCGTCCA
GCCCTCCGCCGATGGAGCCCAACGTAGAGCGTGAGGTCACGCGCCACGTGGGTTGTTTTGGCAGTGGAAACGGACTGGTG
GGTCGGTTTCCGTTTGTGTATCATCAGCCGGGAGTGGTGGCGTTGGGAGGTGGGTGCGTGACCGGGGCGGCTCCTCCTGT
TTTGTTTCTCAACGGGTTTGGGGGATCCAACTTGATGGGTTCGGTTTATCCGGTCCGGTTTGGATTCTGCCTGGAATTGG
GTTTAAGGGTGCGGGTCCGGGATGGATACTGAAACTGAATCATCCTCGGTTGCAGCCGTTTGATTGTAAACCCCAGCAGG
GGTCCTTACCCCCGATCTTTATCTGGCCCCCCCAGTGGTTGACAACATGGGGCGGTCGATCACCGGGGAATTTTTTATAC
TTTACGGAGTGGAAGGGGAGTCGTAAGGGTTTTTGTTTTTTGTAACTATAATTTTTTTACACGGACAGCTTTTTTTGATC
AGGGACTAGAAGGGGAGAAGAGACAGGCACGGTTCGGGACATATGCAGTCCATCAGACAACAGGACACCATTTTTAACCG
GCTGATGTTATAATAGTTGGGAAAAAACGGGCCTTAGGA




Most similar to sp|Q9LW49|ERF4_NICSY

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9LW49|ERF4_NICSY Ethylene-responsive transcription factor 4
           OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1
          Length = 227

 Score =  102 bits (255), Expect = 3e-21
 Identities = 49/70 (70%), Positives = 50/70 (71%)
 Frame = +2

Query: 38  RNNNKKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGSK 217
           + N  KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT                G K
Sbjct: 18  KTNGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPK 77

Query: 218 AKTNFPLPSE 247
           AKTNFPLPSE
Sbjct: 78  AKTNFPLPSE 87